FHIR terminology service for OCL
Build: #164 failed
Job: Build oclfhir failed
Build log
The build generated 160 lines of output. Download or view full build log.
| 06-Sep-2023 09:43:27 | Build Open Concept Lab - OCL FHIR - Build oclfhir #164 (OCL-OF-JOB1-164) started building on agent yu.openmrs.org (3), bamboo version: 8.2.4 |
| 06-Sep-2023 09:43:27 | Remote agent on host yu.openmrs.org |
| 06-Sep-2023 09:43:27 | Build working directory is /home/bamboo-agent/bamboo-agent/xml-data/build-dir/OCL-OF-JOB1 |
| 06-Sep-2023 09:43:27 | Executing build Open Concept Lab - OCL FHIR - Build oclfhir #164 (OCL-OF-JOB1-164) |
| 06-Sep-2023 09:43:27 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
| 06-Sep-2023 09:43:27 | Checking out into /home/bamboo-agent/bamboo-agent/xml-data/build-dir/OCL-OF-JOB1 |
| 06-Sep-2023 09:43:27 | Updating source code to revision: 7aaf924ff1986ebbccab60a05c1d95d4a527f7f2 |
| 06-Sep-2023 09:43:27 | Creating local git repository in '/home/bamboo-agent/bamboo-agent/xml-data/build-dir/_git-repositories-cache/4fc2fb2088af28a9d3e8f92cd5ed4328242a99bc/.git'. |
| 06-Sep-2023 09:43:27 | hint: Using 'master' as the name for the initial branch. This default branch name |
| 06-Sep-2023 09:43:27 | hint: is subject to change. To configure the initial branch name to use in all |
| 06-Sep-2023 09:43:27 | hint: of your new repositories, which will suppress this warning, call: |
| 06-Sep-2023 09:43:27 | hint: |
| 06-Sep-2023 09:43:27 | hint: git config --global init.defaultBranch <name> |
| 06-Sep-2023 09:43:27 | hint: |
| 06-Sep-2023 09:43:27 | hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and |
| 06-Sep-2023 09:43:27 | hint: 'development'. The just-created branch can be renamed via this command: |
| 06-Sep-2023 09:43:27 | hint: |
| 06-Sep-2023 09:43:27 | hint: git branch -m <name> |
| 06-Sep-2023 09:43:27 | Initialized empty Git repository in /home/bamboo-agent/bamboo-agent/xml-data/build-dir/_git-repositories-cache/4fc2fb2088af28a9d3e8f92cd5ed4328242a99bc/.git/ |
| 06-Sep-2023 09:43:28 | Fetching 'refs/heads/master' from 'https://github.com/OpenConceptLab/oclfhir.git'. |
| 06-Sep-2023 09:43:28 | From https://github.com/OpenConceptLab/oclfhir |
| 06-Sep-2023 09:43:28 | * [new branch] master -> master |
| 06-Sep-2023 09:43:28 | Checking out revision 7aaf924ff1986ebbccab60a05c1d95d4a527f7f2. |
| 06-Sep-2023 09:43:28 | Creating local git repository in '/home/bamboo-agent/bamboo-agent/xml-data/build-dir/OCL-OF-JOB1/.git'. |
| 06-Sep-2023 09:43:28 | Cloning into '/home/bamboo-agent/bamboo-agent/xml-data/build-dir/OCL-OF-JOB1'... |
| 06-Sep-2023 09:43:28 | done. |
| 06-Sep-2023 09:43:28 | Already on 'master' |
| 06-Sep-2023 09:43:28 | Your branch is up to date with 'origin/master'. |
| 06-Sep-2023 09:43:28 | Updated source code to revision: 7aaf924ff1986ebbccab60a05c1d95d4a527f7f2 |
| 06-Sep-2023 09:43:28 | Finished task 'Checkout Default Repository' with result: Success |
| 06-Sep-2023 09:43:28 | Running pre-build action: Build Log Labeller Pre Build Action |
| 06-Sep-2023 09:43:28 | Running pre-build action: VCS Version Collector |
| 06-Sep-2023 09:43:28 | Running pre-build action: Run Predator |
| 06-Sep-2023 09:43:28 | [PredatorPreBuildAction] Starting predator plugin, pre build agent cleaner |
| 06-Sep-2023 09:43:28 | [PredatorPreBuildAction] Running these commands: /opt/scripts/cleanup-before-building.sh |
| 06-Sep-2023 09:43:28 | [PredatorPreBuildAction] Running command '[/opt/scripts/cleanup-before-building.sh]' |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] Command '[/opt/scripts/cleanup-before-building.sh]' completed with exit code 0 |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 11642 java 1477 bamboo-age 2948Mb 411Mb 00:00:32 /usr/lib/jvm/java-8-ope |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 1477 wrapper 1 bamboo-age 16Mb 3Mb 00:01:27 /home/bamboo-agent/bamb |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 1 systemd 0 root 164Mb 11Mb 00:00:09 /sbin/init |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] No processes found for (chromium|chrome|webdriver|mysql|java|mvn|node|npm) |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] Initial free space: 5.300579 GB |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] Deleting folder /home/bamboo-agent/bamboo-agent/xml-data/build-dir/CSM-CSM-JOB1 |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] Deleting 17 snapshot folders from /home/bamboo-agent/.m2/repository |
| 06-Sep-2023 09:43:31 | [PredatorPreBuildAction] Maven snapshot disk freed: 0 GB |
| 06-Sep-2023 09:43:32 | [PredatorPreBuildAction] 0 empty artifacts were found and deleted by Predator |
| 06-Sep-2023 09:43:32 | [PredatorPreBuildAction] Maven stable disk freed: 0.57537323 GB, deleted 52 files |
| 06-Sep-2023 09:43:32 | [PredatorPreBuildAction] File /home/bamboo-agent/.npmrc does not exist. |
| 06-Sep-2023 09:43:32 | [PredatorPreBuildAction] File /home/bamboo-agent/.docker/config.json does not exist. |
| 06-Sep-2023 09:43:32 | [PredatorPreBuildAction] File /home/bamboo-agent/.OpenMRS/liquibaseUpdateLogs.txt does not exist. |
| 06-Sep-2023 09:43:32 | [PredatorPreBuildAction] Final free space: 5.356476 GB |
| 06-Sep-2023 09:43:32 | [PredatorPreBuildAction] Done |
| 06-Sep-2023 09:43:32 | Substituting variable: ${bamboo.planRepository.revision} with 7aaf924ff1986ebbccab60a05c1d95d4a527f7f2 |
| 06-Sep-2023 09:43:32 | Substituting variable: ${bamboo.docker.image.name} with openconceptlab/oclfhir |
| 06-Sep-2023 09:43:32 | Substituting variable: ${bamboo.docker.image.tag} with nightly |
| 06-Sep-2023 09:43:32 | Substituting variable: ${bamboo.dockerhub.username} with openmrsci |
| 06-Sep-2023 09:43:32 | Substituting password variable: ${bamboo.dockerhub.password} |
| 06-Sep-2023 09:43:32 | Substituting variable: ${bamboo.docker.image.name} with openconceptlab/oclfhir |
| 06-Sep-2023 09:43:32 | Substituting variable: ${bamboo.docker.image.tag} with nightly |
| 06-Sep-2023 09:43:32 | Substituting variable: ${bamboo.docker.image.name} with openconceptlab/oclfhir |
| 06-Sep-2023 09:43:32 | Substituting variable: ${bamboo.docker.image.tag} with nightly |
| 06-Sep-2023 09:43:32 | Starting task 'Build and push to DockerHub' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 06-Sep-2023 09:43:32 | Beginning to execute external process for build 'Open Concept Lab - OCL FHIR - Build oclfhir #164 (OCL-OF-JOB1-164)' ... running command line: /home/bamboo-agent/bamboo-agent/temp/OCL-OF-JOB1-164-ScriptBuildTask-8708494928862135998.sh ... in: /home/bamboo-agent/bamboo-agent/xml-data/build-dir/OCL-OF-JOB1 |
| 06-Sep-2023 09:43:32 | + [[ ehuB != ehuxB ]] |
| 06-Sep-2023 09:43:32 | + echo 'Start of Lmod init/bash script to define the module command' |
| 06-Sep-2023 09:43:32 | + LMOD_PKG=/usr/share/lmod/lmod |
| 06-Sep-2023 09:43:32 | Start of Lmod init/bash script to define the module command |
| 06-Sep-2023 09:43:32 | + LMOD_DIR=/usr/share/lmod/lmod/libexec |
| 06-Sep-2023 09:43:32 | + LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod |
| 06-Sep-2023 09:43:32 | + MODULESHOME=/usr/share/lmod/lmod |
| 06-Sep-2023 09:43:32 | + export LMOD_PKG |
| 06-Sep-2023 09:43:32 | + export LMOD_CMD |
| 06-Sep-2023 09:43:32 | + export LMOD_DIR |
| 06-Sep-2023 09:43:32 | + export MODULESHOME |
| 06-Sep-2023 09:43:32 | + LMOD_VERSION=6.6 |
| 06-Sep-2023 09:43:32 | + export LMOD_VERSION |
| 06-Sep-2023 09:43:32 | + '[' : '!=' : ']' |
| 06-Sep-2023 09:43:32 | + unalias ml |
| 06-Sep-2023 09:43:32 | + true |
| 06-Sep-2023 09:43:32 | ++ /usr/bin/tr '[:upper:]' '[:lower:]' |
| 06-Sep-2023 09:43:32 | ++ echo YES |
| 06-Sep-2023 09:43:32 | + export_module=yes |
| 06-Sep-2023 09:43:32 | + '[' -n '5.1.16(1)-release' -a yes '!=' no ']' |
| 06-Sep-2023 09:43:32 | + export -f module |
| 06-Sep-2023 09:43:32 | + export -f ml |
| 06-Sep-2023 09:43:32 | + unset export_module |
| 06-Sep-2023 09:43:32 | + '[' -n '' ']' |
| 06-Sep-2023 09:43:32 | End of Lmod init/bash script to define the module command |
| 06-Sep-2023 09:43:32 | + '[' 5 -ge 3 ']' |
| 06-Sep-2023 09:43:32 | + '[' -r /usr/share/lmod/lmod/init/lmod_bash_completions ']' |
| 06-Sep-2023 09:43:32 | + '[' -n '' ']' |
| 06-Sep-2023 09:43:32 | + [[ ehuB != ehuxB ]] |
| 06-Sep-2023 09:43:32 | + echo 'End of Lmod init/bash script to define the module command' |
| 06-Sep-2023 09:43:32 | + set +x |
| 06-Sep-2023 09:43:32 | Sending build context to Docker daemon 5.509MB |
| 06-Sep-2023 09:43:32 | |
| 06-Sep-2023 09:43:32 | Step 1/23 : FROM openjdk:14 as build |
| 06-Sep-2023 09:43:33 | 14: Pulling from library/openjdk |
| 06-Sep-2023 09:43:33 | fd3d5e431db6: Pulling fs layer |
| 06-Sep-2023 09:43:33 | 1004722dc5e0: Pulling fs layer |
| 06-Sep-2023 09:43:33 | 274e305bc330: Pulling fs layer |
| 06-Sep-2023 09:43:33 | 1004722dc5e0: Verifying Checksum |
| 06-Sep-2023 09:43:33 | 1004722dc5e0: Download complete |
| 06-Sep-2023 09:43:34 | fd3d5e431db6: Verifying Checksum |
| 06-Sep-2023 09:43:34 | fd3d5e431db6: Download complete |
| 06-Sep-2023 09:43:35 | 274e305bc330: Verifying Checksum |
| 06-Sep-2023 09:43:35 | 274e305bc330: Download complete |
| 06-Sep-2023 09:43:36 | fd3d5e431db6: Pull complete |
| 06-Sep-2023 09:43:37 | 1004722dc5e0: Pull complete |
| 06-Sep-2023 09:43:41 | 274e305bc330: Pull complete |
| 06-Sep-2023 09:43:41 | Digest: sha256:285998e4fbab7907f11212c3ee2e70827b92481a5afb333bd31585dc0962df31 |
| 06-Sep-2023 09:43:41 | Status: Downloaded newer image for openjdk:14 |
| 06-Sep-2023 09:43:41 | ---> 77606ea825b1 |
| 06-Sep-2023 09:43:41 | Step 2/23 : ARG SOURCE_COMMIT |
| 06-Sep-2023 09:43:41 | ---> Running in d6831f87da02 |
| 06-Sep-2023 09:43:41 | Removing intermediate container d6831f87da02 |
| 06-Sep-2023 09:43:41 | ---> 481bbe7467aa |
| 06-Sep-2023 09:43:41 | Step 3/23 : ARG MAVEN_VERSION=3.6.3 |
| 06-Sep-2023 09:43:41 | ---> Running in 843db98ee646 |
| 06-Sep-2023 09:43:41 | Removing intermediate container 843db98ee646 |
| 06-Sep-2023 09:43:41 | ---> f40237fcee07 |
| 06-Sep-2023 09:43:41 | Step 4/23 : ARG USER_HOME_DIR="/code" |
| 06-Sep-2023 09:43:41 | ---> Running in 0ddcaf1b11e9 |
| 06-Sep-2023 09:43:42 | Removing intermediate container 0ddcaf1b11e9 |
| 06-Sep-2023 09:43:42 | ---> 53a7d38c78ac |
| 06-Sep-2023 09:43:42 | Step 5/23 : ARG SHA=c35a1803a6e70a126e80b2b3ae33eed961f83ed74d18fcd16909b2d44d7dada3203f1ffe726c17ef8dcca2dcaa9fca676987befeadc9b9f759967a8cb77181c0 |
| 06-Sep-2023 09:43:42 | ---> Running in 3cb352f426e1 |
| 06-Sep-2023 09:43:42 | Removing intermediate container 3cb352f426e1 |
| 06-Sep-2023 09:43:42 | ---> bb7750465e0b |
| 06-Sep-2023 09:43:42 | Step 6/23 : ARG BASE_URL=https://apache.osuosl.org/maven/maven-3/${MAVEN_VERSION}/binaries |
| 06-Sep-2023 09:43:42 | ---> Running in ad34df3baa3e |
| 06-Sep-2023 09:43:42 | Removing intermediate container ad34df3baa3e |
| 06-Sep-2023 09:43:42 | ---> b5e24b59a8eb |
| 06-Sep-2023 09:43:42 | Step 7/23 : RUN mkdir -p /usr/share/maven /usr/share/maven/ref && echo "Downloading maven" && curl -fsSL -o /tmp/apache-maven.tar.gz ${BASE_URL}/apache-maven-${MAVEN_VERSION}-bin.tar.gz && echo "Checking download file hash" && echo "${SHA} /tmp/apache-maven.tar.gz" | sha512sum -c - && echo "Unziping maven" && tar -xzf /tmp/apache-maven.tar.gz -C /usr/share/maven --strip-components=1 && echo "Cleaning and setting links" && rm -f /tmp/apache-maven.tar.gz && ln -s /usr/share/maven/bin/mvn /usr/bin/mvn |
| 06-Sep-2023 09:43:42 | ---> Running in d601b307e9c8 |
| 06-Sep-2023 09:43:42 | Downloading maven |
| 06-Sep-2023 09:43:43 | curl: (22) The requested URL returned error: 404 Not Found |
| 06-Sep-2023 09:43:43 | The command '/bin/sh -c mkdir -p /usr/share/maven /usr/share/maven/ref && echo "Downloading maven" && curl -fsSL -o /tmp/apache-maven.tar.gz ${BASE_URL}/apache-maven-${MAVEN_VERSION}-bin.tar.gz && echo "Checking download file hash" && echo "${SHA} /tmp/apache-maven.tar.gz" | sha512sum -c - && echo "Unziping maven" && tar -xzf /tmp/apache-maven.tar.gz -C /usr/share/maven --strip-components=1 && echo "Cleaning and setting links" && rm -f /tmp/apache-maven.tar.gz && ln -s /usr/share/maven/bin/mvn /usr/bin/mvn' returned a non-zero code: 22 |
| 06-Sep-2023 09:43:43 | |
| 06-Sep-2023 09:43:43 | Failing task since return code of [/home/bamboo-agent/bamboo-agent/temp/OCL-OF-JOB1-164-ScriptBuildTask-8708494928862135998.sh] was 22 while expected 0 |
| 06-Sep-2023 09:43:43 | Finished task 'Build and push to DockerHub' with result: Failed |
| 06-Sep-2023 09:43:43 | Running post build plugin 'Docker Container Cleanup' |
| 06-Sep-2023 09:43:43 | Running post build plugin 'NCover Results Collector' |
| 06-Sep-2023 09:43:43 | Running post build plugin 'Build Results Label Collector' |
| 06-Sep-2023 09:43:43 | Running post build plugin 'Clover Results Collector' |
| 06-Sep-2023 09:43:43 | Running post build plugin 'npm Cache Cleanup' |
| 06-Sep-2023 09:43:43 | Running post build plugin 'Artifact Copier' |
| 06-Sep-2023 09:43:43 | Finalising the build... |
| 06-Sep-2023 09:43:43 | Stopping timer. |
| 06-Sep-2023 09:43:43 | Build OCL-OF-JOB1-164 completed. |
| 06-Sep-2023 09:43:43 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 06-Sep-2023 09:43:43 | Running on server: post build plugin 'NCover Results Collector' |
| 06-Sep-2023 09:43:43 | Running on server: post build plugin 'Build Labeller' |
| 06-Sep-2023 09:43:43 | Running on server: post build plugin 'Clover Delta Calculator' |
| 06-Sep-2023 09:43:43 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 06-Sep-2023 09:43:43 | All post build plugins have finished |
| 06-Sep-2023 09:43:43 | Generating build results summary... |
| 06-Sep-2023 09:43:43 | Saving build results to disk... |
| 06-Sep-2023 09:43:43 | Store variable context... |
| 06-Sep-2023 09:43:43 | Finished building OCL-OF-JOB1-164. |