simple 22-Sep-2025 13:00:00 Build OpenMRS environments - Reset demo server - Default Job #3470 (OENV-RD-JOB1-3470) is being prepared for building on agent xiao.openmrs.org (2), bamboo version: 11.0.2 simple 22-Sep-2025 13:00:00 Remote agent on host xiao.openmrs.org simple 22-Sep-2025 13:00:00 Build working directory is /data/bamboo-agent/xml-data/build-dir/OENV-RD-JOB1 simple 22-Sep-2025 13:00:00 Executing build OpenMRS environments - Reset demo server - Default Job #3470 (OENV-RD-JOB1-3470) simple 22-Sep-2025 13:00:00 Running pre-build action: Build Log Labeller Pre Build Action simple 22-Sep-2025 13:00:00 Running pre-build action: VCS Version Collector simple 22-Sep-2025 13:00:00 Running pre-build action: Run Predator simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Starting predator plugin, pre build agent cleaner simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Running these commands: /opt/scripts/cleanup-before-building.sh simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Running command '[/opt/scripts/cleanup-before-building.sh]' simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Command '[/opt/scripts/cleanup-before-building.sh]' completed with exit code 0 simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 30412 java 1484 bamboo-age 3165Mb 474Mb 00:03:54 /usr/lib/jvm/java-21-op simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 1484 wrapper 1422 bamboo-age 88Mb 2Mb 00:22:27 /data/bamboo-agent/bin/ simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 1422 bamboo 734 bamboo-age 3Mb 1Mb 00:00:00 /bin/sh /data/bamboo-ag simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 734 java 1 bamboo-age 4038Mb 89Mb 00:17:11 /usr/lib/jvm/java-21-op simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 1 systemd 0 root 164Mb 11Mb 00:04:09 /sbin/init simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] No processes found for (chromium|chrome|webdriver|mysql|java|mvn|node|npm) simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Initial free space: 60.458996 GB simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/FHIR-FM227-BTJ8 simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/temporaryArtifactStorage simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/REGAPP-REGAPP-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/METAM-METAM-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/EMRAPI-EMRAPI-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/O3-DD3-JOB1 simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HTML-HFE5-BTJ8 simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HFEUI-HFEUI-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HTML-HFE5-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HFEUI-HFEUI-RTMVN simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/METAM-METAM-BTJ8 simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/RESTWS-RESTWS-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/OCLM-OCLM-RTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/META-META-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/QM-QUEUE-RTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/FHIR-FM2-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/EMRAPI-EMRAPI3-DTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HTML-HFE5-RTM simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting 13 snapshot folders from /home/bamboo-agent/.m2/repository simple 22-Sep-2025 13:00:00 [PredatorPreBuildAction] Maven snapshot disk freed: 0 GB simple 22-Sep-2025 13:00:01 [PredatorPreBuildAction] 0 empty artifacts were found and deleted by Predator simple 22-Sep-2025 13:00:01 [PredatorPreBuildAction] Maven stable disk freed: 0.0 GB, deleted 0 files simple 22-Sep-2025 13:00:01 [PredatorPreBuildAction] File /home/bamboo-agent/.npmrc does not exist. simple 22-Sep-2025 13:00:01 [PredatorPreBuildAction] File /home/bamboo-agent/.docker/config.json does not exist. simple 22-Sep-2025 13:00:01 [PredatorPreBuildAction] File /home/bamboo-agent/.OpenMRS/liquibaseUpdateLogs.txt does not exist. simple 22-Sep-2025 13:00:01 [PredatorPreBuildAction] Final free space: 60.458996 GB simple 22-Sep-2025 13:00:01 [PredatorPreBuildAction] Done simple 22-Sep-2025 13:00:01 Build OpenMRS environments - Reset demo server - Default Job #3470 (OENV-RD-JOB1-3470) started building on agent 'xiao.openmrs.org (2)' (Remote agent on host xiao.openmrs.org) simple 22-Sep-2025 13:00:01 Starting task 'Redeploy demo' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 22-Sep-2025 13:00:01 Beginning to execute external process for build 'OpenMRS environments - Reset demo server - Default Job #3470 (OENV-RD-JOB1-3470)'\n ... running command line: \n/bin/sh /data/bamboo-agent/temp/OENV-RD-JOB1-3470-ScriptBuildTask-15390857806052494228.sh\n ... in: /data/bamboo-agent/xml-data/build-dir/OENV-RD-JOB1\n error 22-Sep-2025 13:00:01 Warning: Permanently added 'demo.openmrs.org' (ED25519) to the list of known hosts. build 22-Sep-2025 13:00:02 Removing unused images if any error 22-Sep-2025 13:00:03 time="2025-09-22T13:00:03Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion" error 22-Sep-2025 13:00:03 openmrs-referenceapplication Pulling error 22-Sep-2025 13:00:03 openmrs-referenceapplication-mysql Pulling error 22-Sep-2025 13:00:04 openmrs-referenceapplication-mysql Pulled error 22-Sep-2025 13:00:04 openmrs-referenceapplication Pulled build 22-Sep-2025 13:00:04 Recreating all images and volumes error 22-Sep-2025 13:00:04 time="2025-09-22T13:00:04Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion" error 22-Sep-2025 13:00:04 Container demo-openmrs-referenceapplication-1 Stopping error 22-Sep-2025 13:00:05 Container demo-openmrs-referenceapplication-1 Stopped error 22-Sep-2025 13:00:05 Container demo-openmrs-referenceapplication-1 Removing error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-1 Removed error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1 Stopping error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1 Stopped error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1 Removing error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1 Removed error 22-Sep-2025 13:00:08 Network demo_default Removing error 22-Sep-2025 13:00:08 Network demo_default Removed error 22-Sep-2025 13:00:08 time="2025-09-22T13:00:08Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion" error 22-Sep-2025 13:00:08 Network demo_default Creating error 22-Sep-2025 13:00:08 Network demo_default Created error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1 Creating error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1 Created error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-1 Creating error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-1 Created error 22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1 Starting error 22-Sep-2025 13:00:09 Container demo-openmrs-referenceapplication-mysql-1 Started error 22-Sep-2025 13:00:09 Container demo-openmrs-referenceapplication-1 Starting error 22-Sep-2025 13:00:09 Container demo-openmrs-referenceapplication-1 Started error 22-Sep-2025 13:00:09 time="2025-09-22T13:00:09Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion" build 22-Sep-2025 13:00:09 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:00:09 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:00:09 Status found: "starting" build 22-Sep-2025 13:00:09 Waiting 15s build 22-Sep-2025 13:00:24 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:00:24 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:00:24 Status found: "starting" "unhealthy" build 22-Sep-2025 13:00:24 Waiting 15s build 22-Sep-2025 13:00:39 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:00:39 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:00:39 Status found: "starting" "unhealthy" build 22-Sep-2025 13:00:39 Waiting 15s build 22-Sep-2025 13:00:54 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:00:54 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:00:54 Status found: "starting" "unhealthy" build 22-Sep-2025 13:00:54 Waiting 15s build 22-Sep-2025 13:01:09 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:01:09 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:01:09 Status found: "starting" "unhealthy" build 22-Sep-2025 13:01:09 Waiting 15s build 22-Sep-2025 13:01:24 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:01:24 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:01:24 Status found: "starting" "unhealthy" build 22-Sep-2025 13:01:24 Waiting 15s build 22-Sep-2025 13:01:39 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:01:39 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:01:39 Status found: "unhealthy" build 22-Sep-2025 13:01:39 Waiting 15s build 22-Sep-2025 13:01:54 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:01:54 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:01:54 Status found: "unhealthy" build 22-Sep-2025 13:01:54 Waiting 15s build 22-Sep-2025 13:02:09 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:02:09 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:02:10 Status found: "unhealthy" build 22-Sep-2025 13:02:10 Waiting 15s build 22-Sep-2025 13:02:25 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:02:25 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:02:25 Status found: "unhealthy" build 22-Sep-2025 13:02:25 Waiting 15s build 22-Sep-2025 13:02:40 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:02:40 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:02:40 Status found: "unhealthy" build 22-Sep-2025 13:02:40 Waiting 15s build 22-Sep-2025 13:02:55 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:02:55 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:02:55 Status found: "unhealthy" build 22-Sep-2025 13:02:55 Waiting 15s build 22-Sep-2025 13:03:10 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:03:10 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:03:10 Status found: "unhealthy" build 22-Sep-2025 13:03:10 Waiting 15s build 22-Sep-2025 13:03:25 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:03:25 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:03:25 Status found: "unhealthy" build 22-Sep-2025 13:03:25 Waiting 15s build 22-Sep-2025 13:03:40 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:03:40 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:03:40 Status found: "unhealthy" build 22-Sep-2025 13:03:40 Waiting 15s build 22-Sep-2025 13:03:55 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:03:55 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:03:55 Status found: "unhealthy" build 22-Sep-2025 13:03:55 Waiting 15s build 22-Sep-2025 13:04:10 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:04:10 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:04:10 Status found: "unhealthy" build 22-Sep-2025 13:04:10 Waiting 15s build 22-Sep-2025 13:04:25 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:04:25 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:04:25 Status found: "unhealthy" build 22-Sep-2025 13:04:25 Waiting 15s build 22-Sep-2025 13:04:40 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:04:40 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:04:40 Status found: "unhealthy" build 22-Sep-2025 13:04:40 Waiting 15s build 22-Sep-2025 13:04:55 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf build 22-Sep-2025 13:04:55 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy build 22-Sep-2025 13:04:55 Status found: "unhealthy" build 22-Sep-2025 13:04:55 Waiting 15s build 22-Sep-2025 13:05:10 #################################################### error 22-Sep-2025 13:05:10 time="2025-09-22T13:05:10Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion" build 22-Sep-2025 13:05:10 openmrs-referenceapplication-1 | Initiating OpenMRS startup build 22-Sep-2025 13:05:10 openmrs-referenceapplication-1 | Deleting modules, OWAs and configuration from OpenMRS build 22-Sep-2025 13:05:10 openmrs-referenceapplication-1 | Loading distribution artifacts into OpenMRS build 22-Sep-2025 13:05:10 openmrs-referenceapplication-1 | Writing out /openmrs/openmrs-server.properties build 22-Sep-2025 13:05:10 openmrs-referenceapplication-1 | Waiting for database to initialize... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-1 | wait-for-it.sh: waiting 3600 seconds for openmrs-referenceapplication-mysql:3306 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: The first specified data file ./ibdata1 did not exist: a new database to be created! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Setting file ./ibdata1 size to 12 MB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] InnoDB: Database physically writes the file full: wait... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 7f833b1200402025-09-22 13:00:09 46 [ERROR] InnoDB: Failure of system call pwrite(). Operating system error number is 28. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | InnoDB: Error number 28 means 'No space left on device'. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | InnoDB: Some operating system error numbers are described at build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | InnoDB: http://dev.mysql.com/doc/refman/5.6/en/operating-system-error-codes.html build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [ERROR] InnoDB: Error in creating ./ibdata1: probably out of disk space build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:09 46 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:10 46 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:11 46 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:12 46 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:13+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:13+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:13+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:14 45 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:16 46 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:19+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:19+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:19+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 47 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:20 47 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:26+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:27 45 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:00:40 45 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:06 45 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:01:58 45 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:02:59 45 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:03:59+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:03:59+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:03:59+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:03:59+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:04:00 45 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql' build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00+00:00 [Note] [Entrypoint]: Initializing database files build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details). build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ... build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: Using atomics to ref count buffer pool pages build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: The InnoDB memory heap is disabled build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: Memory barrier is not used build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: Compressed tables use zlib 1.2.11 build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: Using Linux native AIO build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: Using CPU crc32 instructions build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] InnoDB: Completed initialization of buffer pool build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data! build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [ERROR] Plugin 'InnoDB' init function returned error. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed. build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [ERROR] Unknown/unsupported storage engine: InnoDB build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [ERROR] Aborting build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] Binlog end build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | 2025-09-22 13:05:00 46 [Note] /usr/sbin/mysqld: Shutdown complete build 22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1 | simple 22-Sep-2025 13:05:10 Failing task since return code of [/bin/sh /data/bamboo-agent/temp/OENV-RD-JOB1-3470-ScriptBuildTask-15390857806052494228.sh] was 1 while expected 0 simple 22-Sep-2025 13:05:10 Finished task 'Redeploy demo' with result: Failed simple 22-Sep-2025 13:05:10 Running post build plugin 'Docker Container Cleanup' simple 22-Sep-2025 13:05:10 Running post build plugin 'NCover Results Collector' simple 22-Sep-2025 13:05:10 Running post build plugin 'Build Results Label Collector' simple 22-Sep-2025 13:05:10 Running post build plugin 'Clover Results Collector' simple 22-Sep-2025 13:05:10 Running post build plugin 'npm Cache Cleanup' simple 22-Sep-2025 13:05:10 Running post build plugin 'Artifact Copier' simple 22-Sep-2025 13:05:10 Finalising the build... simple 22-Sep-2025 13:05:10 Stopping timer. simple 22-Sep-2025 13:05:10 Build OENV-RD-JOB1-3470 completed. simple 22-Sep-2025 13:05:10 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 22-Sep-2025 13:05:10 Running on server: post build plugin 'NCover Results Collector' simple 22-Sep-2025 13:05:10 Running on server: post build plugin 'Build Labeller' simple 22-Sep-2025 13:05:10 Running on server: post build plugin 'Clover Delta Calculator' simple 22-Sep-2025 13:05:10 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 22-Sep-2025 13:05:10 All post build plugins have finished simple 22-Sep-2025 13:05:10 Generating build results summary... simple 22-Sep-2025 13:05:10 Saving build results to disk... simple 22-Sep-2025 13:05:10 Store variable context... simple 22-Sep-2025 13:05:10 Finished building OENV-RD-JOB1-3470.