Build: #3470 failed

Job: Default Job failed

Stages & jobs

  1. Default Stage

Build log

The build generated 559 lines of output. Download or view full build log.

22-Sep-2025 13:00:00 Build OpenMRS environments - Reset demo server - Default Job #3470 (OENV-RD-JOB1-3470) is being prepared for building on agent xiao.openmrs.org (2), bamboo version: 11.0.2
22-Sep-2025 13:00:00 Remote agent on host xiao.openmrs.org
22-Sep-2025 13:00:00 Build working directory is /data/bamboo-agent/xml-data/build-dir/OENV-RD-JOB1
22-Sep-2025 13:00:00 Executing build OpenMRS environments - Reset demo server - Default Job #3470 (OENV-RD-JOB1-3470)
22-Sep-2025 13:00:00 Running pre-build action: Build Log Labeller Pre Build Action
22-Sep-2025 13:00:00 Running pre-build action: VCS Version Collector
22-Sep-2025 13:00:00 Running pre-build action: Run Predator
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Starting predator plugin, pre build agent cleaner
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Running these commands: /opt/scripts/cleanup-before-building.sh
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Running command '[/opt/scripts/cleanup-before-building.sh]'
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Command '[/opt/scripts/cleanup-before-building.sh]' completed with exit code 0
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent): 30412 java        1484 bamboo-age 3165Mb  474Mb 00:03:54 /usr/lib/jvm/java-21-op
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent):  1484 wrapper     1422 bamboo-age   88Mb    2Mb 00:22:27 /data/bamboo-agent/bin/
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent):  1422 bamboo       734 bamboo-age    3Mb    1Mb 00:00:00 /bin/sh /data/bamboo-ag
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent):   734 java           1 bamboo-age 4038Mb   89Mb 00:17:11 /usr/lib/jvm/java-21-op
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Identifying Bamboo agent process (or parent):     1 systemd        0 root        164Mb   11Mb 00:04:09 /sbin/init             
22-Sep-2025 13:00:00 [PredatorPreBuildAction] No processes found for (chromium|chrome|webdriver|mysql|java|mvn|node|npm)
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Initial free space: 60.458996 GB
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/FHIR-FM227-BTJ8
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/temporaryArtifactStorage
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/REGAPP-REGAPP-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/METAM-METAM-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/EMRAPI-EMRAPI-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/O3-DD3-JOB1
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HTML-HFE5-BTJ8
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HFEUI-HFEUI-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HTML-HFE5-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HFEUI-HFEUI-RTMVN
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/METAM-METAM-BTJ8
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/RESTWS-RESTWS-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/OCLM-OCLM-RTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/META-META-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/QM-QUEUE-RTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/FHIR-FM2-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/EMRAPI-EMRAPI3-DTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting folder /data/bamboo-agent/xml-data/build-dir/HTML-HFE5-RTM
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Deleting 13 snapshot folders from /home/bamboo-agent/.m2/repository
22-Sep-2025 13:00:00 [PredatorPreBuildAction] Maven snapshot disk freed: 0 GB
22-Sep-2025 13:00:01 [PredatorPreBuildAction] 0 empty artifacts were found and deleted by Predator
22-Sep-2025 13:00:01 [PredatorPreBuildAction] Maven stable disk freed: 0.0 GB, deleted 0 files
22-Sep-2025 13:00:01 [PredatorPreBuildAction] File /home/bamboo-agent/.npmrc does not exist.
22-Sep-2025 13:00:01 [PredatorPreBuildAction] File /home/bamboo-agent/.docker/config.json does not exist.
22-Sep-2025 13:00:01 [PredatorPreBuildAction] File /home/bamboo-agent/.OpenMRS/liquibaseUpdateLogs.txt does not exist.
22-Sep-2025 13:00:01 [PredatorPreBuildAction] Final free space: 60.458996 GB
22-Sep-2025 13:00:01 [PredatorPreBuildAction] Done
22-Sep-2025 13:00:01 Build OpenMRS environments - Reset demo server - Default Job #3470 (OENV-RD-JOB1-3470) started building on agent 'xiao.openmrs.org (2)' (Remote agent on host xiao.openmrs.org)
22-Sep-2025 13:00:01 Starting task 'Redeploy demo' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
22-Sep-2025 13:00:01
Beginning to execute external process for build 'OpenMRS environments - Reset demo server - Default Job #3470 (OENV-RD-JOB1-3470)'
... running command line:
/bin/sh /data/bamboo-agent/temp/OENV-RD-JOB1-3470-ScriptBuildTask-15390857806052494228.sh
... in: /data/bamboo-agent/xml-data/build-dir/OENV-RD-JOB1
22-Sep-2025 13:00:01 Warning: Permanently added 'demo.openmrs.org' (ED25519) to the list of known hosts.
22-Sep-2025 13:00:02 Removing unused images if any
22-Sep-2025 13:00:03 time="2025-09-22T13:00:03Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion"
22-Sep-2025 13:00:03 openmrs-referenceapplication Pulling
22-Sep-2025 13:00:03 openmrs-referenceapplication-mysql Pulling
22-Sep-2025 13:00:04 openmrs-referenceapplication-mysql Pulled
22-Sep-2025 13:00:04 openmrs-referenceapplication Pulled
22-Sep-2025 13:00:04 Recreating all images and volumes
22-Sep-2025 13:00:04 time="2025-09-22T13:00:04Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion"
22-Sep-2025 13:00:04 Container demo-openmrs-referenceapplication-1  Stopping
22-Sep-2025 13:00:05 Container demo-openmrs-referenceapplication-1  Stopped
22-Sep-2025 13:00:05 Container demo-openmrs-referenceapplication-1  Removing
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-1  Removed
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1  Stopping
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1  Stopped
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1  Removing
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1  Removed
22-Sep-2025 13:00:08 Network demo_default  Removing
22-Sep-2025 13:00:08 Network demo_default  Removed
22-Sep-2025 13:00:08 time="2025-09-22T13:00:08Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion"
22-Sep-2025 13:00:08 Network demo_default  Creating
22-Sep-2025 13:00:08 Network demo_default  Created
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1  Creating
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1  Created
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-1  Creating
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-1  Created
22-Sep-2025 13:00:08 Container demo-openmrs-referenceapplication-mysql-1  Starting
22-Sep-2025 13:00:09 Container demo-openmrs-referenceapplication-mysql-1  Started
22-Sep-2025 13:00:09 Container demo-openmrs-referenceapplication-1  Starting
22-Sep-2025 13:00:09 Container demo-openmrs-referenceapplication-1  Started
22-Sep-2025 13:00:09 time="2025-09-22T13:00:09Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion"
22-Sep-2025 13:00:09 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:00:09 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:00:09 Status found: "starting"
22-Sep-2025 13:00:09 Waiting 15s
22-Sep-2025 13:00:24 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:00:24 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:00:24 Status found: "starting" "unhealthy"
22-Sep-2025 13:00:24 Waiting 15s
22-Sep-2025 13:00:39 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:00:39 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:00:39 Status found: "starting" "unhealthy"
22-Sep-2025 13:00:39 Waiting 15s
22-Sep-2025 13:00:54 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:00:54 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:00:54 Status found: "starting" "unhealthy"
22-Sep-2025 13:00:54 Waiting 15s
22-Sep-2025 13:01:09 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:01:09 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:01:09 Status found: "starting" "unhealthy"
22-Sep-2025 13:01:09 Waiting 15s
22-Sep-2025 13:01:24 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:01:24 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:01:24 Status found: "starting" "unhealthy"
22-Sep-2025 13:01:24 Waiting 15s
22-Sep-2025 13:01:39 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:01:39 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:01:39 Status found: "unhealthy"
22-Sep-2025 13:01:39 Waiting 15s
22-Sep-2025 13:01:54 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:01:54 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:01:54 Status found: "unhealthy"
22-Sep-2025 13:01:54 Waiting 15s
22-Sep-2025 13:02:09 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:02:09 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:02:10 Status found: "unhealthy"
22-Sep-2025 13:02:10 Waiting 15s
22-Sep-2025 13:02:25 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:02:25 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:02:25 Status found: "unhealthy"
22-Sep-2025 13:02:25 Waiting 15s
22-Sep-2025 13:02:40 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:02:40 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:02:40 Status found: "unhealthy"
22-Sep-2025 13:02:40 Waiting 15s
22-Sep-2025 13:02:55 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:02:55 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:02:55 Status found: "unhealthy"
22-Sep-2025 13:02:55 Waiting 15s
22-Sep-2025 13:03:10 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:03:10 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:03:10 Status found: "unhealthy"
22-Sep-2025 13:03:10 Waiting 15s
22-Sep-2025 13:03:25 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:03:25 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:03:25 Status found: "unhealthy"
22-Sep-2025 13:03:25 Waiting 15s
22-Sep-2025 13:03:40 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:03:40 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:03:40 Status found: "unhealthy"
22-Sep-2025 13:03:40 Waiting 15s
22-Sep-2025 13:03:55 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:03:55 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:03:55 Status found: "unhealthy"
22-Sep-2025 13:03:55 Waiting 15s
22-Sep-2025 13:04:10 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:04:10 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:04:10 Status found: "unhealthy"
22-Sep-2025 13:04:10 Waiting 15s
22-Sep-2025 13:04:25 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:04:25 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:04:25 Status found: "unhealthy"
22-Sep-2025 13:04:25 Waiting 15s
22-Sep-2025 13:04:40 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:04:40 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:04:40 Status found: "unhealthy"
22-Sep-2025 13:04:40 Waiting 15s
22-Sep-2025 13:04:55 Verifying if docker containers e8a7714c4933b42a4c9319db8bcda85802e8e4822bac98e53166d776575857bf
22-Sep-2025 13:04:55 6eb3a40babfc5cdcddef8f04d403986961419e98aee86da617f32c5d5a0aa0ca are healthy
22-Sep-2025 13:04:55 Status found: "unhealthy"
22-Sep-2025 13:04:55 Waiting 15s
22-Sep-2025 13:05:10 ####################################################
22-Sep-2025 13:05:10 time="2025-09-22T13:05:10Z" level=warning msg="/root/docker/demo/docker-compose.yml: the attribute `version` is obsolete, it will be ignored, please remove it to avoid potential confusion"
22-Sep-2025 13:05:10 openmrs-referenceapplication-1  | Initiating OpenMRS startup
22-Sep-2025 13:05:10 openmrs-referenceapplication-1  | Deleting modules, OWAs and configuration from OpenMRS
22-Sep-2025 13:05:10 openmrs-referenceapplication-1  | Loading distribution artifacts into OpenMRS
22-Sep-2025 13:05:10 openmrs-referenceapplication-1  | Writing out /openmrs/openmrs-server.properties
22-Sep-2025 13:05:10 openmrs-referenceapplication-1  | Waiting for database to initialize...
22-Sep-2025 13:05:10 openmrs-referenceapplication-1  | wait-for-it.sh: waiting 3600 seconds for openmrs-referenceapplication-mysql:3306
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: The first specified data file ./ibdata1 did not exist: a new database to be created!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Setting file ./ibdata1 size to 12 MB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] InnoDB: Database physically writes the file full: wait...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 7f833b1200402025-09-22 13:00:09 46 [ERROR] InnoDB: Failure of system call pwrite(). Operating system error number is 28.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | InnoDB: Error number 28 means 'No space left on device'.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | InnoDB: Some operating system error numbers are described at
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | InnoDB: http://dev.mysql.com/doc/refman/5.6/en/operating-system-error-codes.html
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [ERROR] InnoDB: Error in creating ./ibdata1: probably out of disk space
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:09 46 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:10 46 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:11 46 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:12 46 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:13+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:13+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:13+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:14 45 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:16 46 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:19+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:19+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:19+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 47 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:20 47 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:26+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:27 45 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:00:40 45 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:06 45 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:01:58 45 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:02:59 45 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:03:59+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:03:59+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:03:59+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:03:59+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 45 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:04:00 45 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00+00:00 [Note] [Entrypoint]: Switching to dedicated user 'mysql'
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00+00:00 [Note] [Entrypoint]: Entrypoint script for MySQL Server 5.6.51-1debian9 started.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00+00:00 [Note] [Entrypoint]: Initializing database files
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 0 [Note] Ignoring --secure-file-priv value as server is running with --bootstrap.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 0 [Note] /usr/sbin/mysqld (mysqld 5.6.51) starting as process 46 ...
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: Using atomics to ref count buffer pool pages
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: The InnoDB memory heap is disabled
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: Memory barrier is not used
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: Compressed tables use zlib 1.2.11
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: Using Linux native AIO
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: Using CPU crc32 instructions
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: Initializing buffer pool, size = 128.0M
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] InnoDB: Completed initialization of buffer pool
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [ERROR] InnoDB: auto-extending data file ./ibdata1 is of a different size 0 pages (rounded down to MB) than specified in the .cnf file: initial 768 pages, max 0 (relevant if non-zero) pages!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [ERROR] InnoDB: Could not open or create the system tablespace. If you tried to add new data files to the system tablespace, and it failed here, you should now edit innodb_data_file_path in my.cnf back to what it was, and remove the new ibdata files InnoDB created in this failed attempt. InnoDB only wrote those files full of zeros, but did not yet use them in any way. But be careful: do not remove old data files which contain your precious data!
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [ERROR] Plugin 'InnoDB' init function returned error.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [ERROR] Plugin 'InnoDB' registration as a STORAGE ENGINE failed.
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [ERROR] Unknown/unsupported storage engine: InnoDB
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [ERROR] Aborting
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] Binlog end
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  | 2025-09-22 13:05:00 46 [Note] /usr/sbin/mysqld: Shutdown complete
22-Sep-2025 13:05:10 openmrs-referenceapplication-mysql-1  |
22-Sep-2025 13:05:10 Failing task since return code of [/bin/sh /data/bamboo-agent/temp/OENV-RD-JOB1-3470-ScriptBuildTask-15390857806052494228.sh] was 1 while expected 0
22-Sep-2025 13:05:10 Finished task 'Redeploy demo' with result: Failed
22-Sep-2025 13:05:10 Running post build plugin 'Docker Container Cleanup'
22-Sep-2025 13:05:10 Running post build plugin 'NCover Results Collector'
22-Sep-2025 13:05:10 Running post build plugin 'Build Results Label Collector'
22-Sep-2025 13:05:10 Running post build plugin 'Clover Results Collector'
22-Sep-2025 13:05:10 Running post build plugin 'npm Cache Cleanup'
22-Sep-2025 13:05:10 Running post build plugin 'Artifact Copier'
22-Sep-2025 13:05:10 Finalising the build...
22-Sep-2025 13:05:10 Stopping timer.
22-Sep-2025 13:05:10 Build OENV-RD-JOB1-3470 completed.
22-Sep-2025 13:05:10 Running on server: post build plugin 'Build Hanging Detection Configuration'
22-Sep-2025 13:05:10 Running on server: post build plugin 'NCover Results Collector'
22-Sep-2025 13:05:10 Running on server: post build plugin 'Build Labeller'
22-Sep-2025 13:05:10 Running on server: post build plugin 'Clover Delta Calculator'
22-Sep-2025 13:05:10 Running on server: post build plugin 'Maven Dependencies Postprocessor'
22-Sep-2025 13:05:10 All post build plugins have finished
22-Sep-2025 13:05:10 Generating build results summary...
22-Sep-2025 13:05:10 Saving build results to disk...
22-Sep-2025 13:05:10 Store variable context...
22-Sep-2025 13:05:10 Finished building OENV-RD-JOB1-3470.